Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm27622-201ENSMUST00000183779 60 ntBASIC18.13■□□□□ 0.49
Smc4Q8CG47 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc4Q8CG47 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Gm18766-201ENSMUST00000189811 808 ntBASIC18.12■□□□□ 0.49
Smc4Q8CG47 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc4Q8CG47 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.11■□□□□ 0.49
Smc4Q8CG47 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Olfr286-202ENSMUST00000205305 969 ntBASIC18.11■□□□□ 0.49
Smc4Q8CG47 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc4Q8CG47 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Gm14057-201ENSMUST00000120631 482 ntBASIC18.1■□□□□ 0.49
Smc4Q8CG47 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Gm27618-201ENSMUST00000183671 60 ntBASIC18.1■□□□□ 0.49
Smc4Q8CG47 Gm20949-201ENSMUST00000206478 952 ntBASIC18.1■□□□□ 0.49
Smc4Q8CG47 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms