Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.22■□□□□ 0.51
Smc5Q8CG46 Gm2451-201ENSMUST00000199447 999 ntBASIC18.22■□□□□ 0.51
Smc5Q8CG46 Gm10290-201ENSMUST00000200451 999 ntBASIC18.22■□□□□ 0.51
Smc5Q8CG46 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc5Q8CG46 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.21■□□□□ 0.51
Smc5Q8CG46 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smc5Q8CG46 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.21■□□□□ 0.5
Smc5Q8CG46 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Smc5Q8CG46 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smc5Q8CG46 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smc5Q8CG46 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smc5Q8CG46 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Gm7862-201ENSMUST00000121461 292 ntBASIC18.2■□□□□ 0.5
Smc5Q8CG46 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc5Q8CG46 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Gm7153-201ENSMUST00000117092 455 ntBASIC18.19■□□□□ 0.5
Smc5Q8CG46 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc5Q8CG46 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.18■□□□□ 0.5
Smc5Q8CG46 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms