Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vcpip1Q8CDG3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vcpip1Q8CDG3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vcpip1Q8CDG3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Vcpip1Q8CDG3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vcpip1Q8CDG3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vcpip1Q8CDG3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Gm6736-201ENSMUST00000166583 948 ntBASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vcpip1Q8CDG3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Gm4899-201ENSMUST00000178708 719 ntBASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vcpip1Q8CDG3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Gm13036-201ENSMUST00000117799 748 ntBASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Gm11779-201ENSMUST00000118541 368 ntBASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms