Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.15■□□□□ 0.34
Alx1Q8C8B0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Gm13616-201ENSMUST00000120600 222 ntBASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Alx1Q8C8B0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx1Q8C8B0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Gm5566-201ENSMUST00000116118 459 ntBASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Gm6415-201ENSMUST00000118488 348 ntBASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Gm28630-201ENSMUST00000187806 498 ntBASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms