Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim4Q8C1Q6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Smim4Q8C1Q6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smim4Q8C1Q6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim4Q8C1Q6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Gm9103-201ENSMUST00000119371 405 ntBASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Gm7230-201ENSMUST00000173026 815 ntBASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Gm5682-201ENSMUST00000173402 505 ntBASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smim4Q8C1Q6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Gm12008-201ENSMUST00000117791 755 ntBASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Gm15173-201ENSMUST00000122049 433 ntBASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Gm34391-201ENSMUST00000203706 907 ntBASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smim4Q8C1Q6 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.33□□□□□ -0.43
Smim4Q8C1Q6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Gm6550-201ENSMUST00000187574 993 ntBASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms