Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Gm15653-201ENSMUST00000119247 907 ntBASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Gm45453-201ENSMUST00000211758 853 ntBASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Gm15487-201ENSMUST00000122373 465 ntBASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scfd1Q8BRF7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scfd1Q8BRF7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Gm14719-201ENSMUST00000121891 340 ntBASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Gm5866-201ENSMUST00000177881 973 ntBASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scfd1Q8BRF7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms