Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp54Q8BL06 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp54Q8BL06 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp54Q8BL06 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Usp54Q8BL06 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp54Q8BL06 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp54Q8BL06 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Gm12957-201ENSMUST00000117835 377 ntBASIC20.62■□□□□ 0.89
Usp54Q8BL06 Gm11524-201ENSMUST00000119349 807 ntBASIC20.62■□□□□ 0.89
Usp54Q8BL06 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Gm8062-201ENSMUST00000139696 444 ntBASIC20.62■□□□□ 0.89
Usp54Q8BL06 Snora78-201ENSMUST00000158630 128 ntBASIC20.62■□□□□ 0.89
Usp54Q8BL06 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Gm18027-201ENSMUST00000218947 619 ntBASIC20.62■□□□□ 0.89
Usp54Q8BL06 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Usp54Q8BL06 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Usp54Q8BL06 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp54Q8BL06 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Ighv8-14-201ENSMUST00000196781 358 ntBASIC20.61■□□□□ 0.89
Usp54Q8BL06 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp54Q8BL06 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Gm13034-201ENSMUST00000121342 3177 ntBASIC20.6■□□□□ 0.89
Usp54Q8BL06 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp54Q8BL06 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Gm13392-201ENSMUST00000117708 150 ntBASIC20.59■□□□□ 0.89
Usp54Q8BL06 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp54Q8BL06 AC125117.1-201ENSMUST00000228121 468 ntBASIC20.59■□□□□ 0.89
Usp54Q8BL06 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp54Q8BL06 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC20.59■□□□□ 0.89
Usp54Q8BL06 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Usp54Q8BL06 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC20.58■□□□□ 0.89
Usp54Q8BL06 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp54Q8BL06 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp54Q8BL06 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp54Q8BL06 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp54Q8BL06 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp54Q8BL06 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp54Q8BL06 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp54Q8BL06 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.58■□□□□ 0.88
Usp54Q8BL06 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp54Q8BL06 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC20.58■□□□□ 0.88
Usp54Q8BL06 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Usp54Q8BL06 Gm18905-201ENSMUST00000205454 928 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms