Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Gm25990-201ENSMUST00000102440 86 ntBASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Gm12008-201ENSMUST00000117791 755 ntBASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Gm28033-201ENSMUST00000184224 96 ntBASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.1■□□□□ 0.01
Chmp2bQ8BJF9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp2bQ8BJF9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chmp2bQ8BJF9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.08■□□□□ 0.01
Chmp2bQ8BJF9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.08■□□□□ 0.01
Chmp2bQ8BJF9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
Chmp2bQ8BJF9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Chmp2bQ8BJF9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms