Protein–RNA interactions for Protein: Q8BIG4

Fbxo28, F-box only protein 28, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fbxo28Q8BIG4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Gm11424-201ENSMUST00000121929 829 ntBASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Gm29667-201ENSMUST00000190817 490 ntBASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fbxo28Q8BIG4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Gm4875-201ENSMUST00000118257 786 ntBASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fbxo28Q8BIG4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Gm45453-201ENSMUST00000211758 853 ntBASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fbxo28Q8BIG4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fbxo28Q8BIG4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fbxo28Q8BIG4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fbxo28Q8BIG4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fbxo28Q8BIG4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fbxo28Q8BIG4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.6■□□□□ 0.25
Fbxo28Q8BIG4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms