Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trim50Q810I2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim50Q810I2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
Trim50Q810I2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim50Q810I2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Gm9385-201ENSMUST00000117563 472 ntBASIC14.34□□□□□ -0.11
Trim50Q810I2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Gm14494-201ENSMUST00000118786 435 ntBASIC14.34□□□□□ -0.11
Trim50Q810I2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.34□□□□□ -0.11
Trim50Q810I2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.34□□□□□ -0.11
Trim50Q810I2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim50Q810I2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim50Q810I2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim50Q810I2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim50Q810I2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim50Q810I2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim50Q810I2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim50Q810I2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim50Q810I2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.33□□□□□ -0.12
Trim50Q810I2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim50Q810I2 Gm16026-204ENSMUST00000162652 683 ntBASIC14.33□□□□□ -0.12
Trim50Q810I2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.33□□□□□ -0.12
Trim50Q810I2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trim50Q810I2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim50Q810I2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim50Q810I2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim50Q810I2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim50Q810I2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim50Q810I2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Trim50Q810I2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim50Q810I2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.32□□□□□ -0.12
Trim50Q810I2 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.32□□□□□ -0.12
Trim50Q810I2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim50Q810I2 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.32□□□□□ -0.12
Trim50Q810I2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.32□□□□□ -0.12
Trim50Q810I2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim50Q810I2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms