Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.46□□□□□ -0.41
Upk3bQ80YF6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3bQ80YF6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Upk3bQ80YF6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.45□□□□□ -0.42
Upk3bQ80YF6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Gm7284-201ENSMUST00000131667 944 ntBASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.45□□□□□ -0.42
Upk3bQ80YF6 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3bQ80YF6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms