Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ttc28Q80XJ3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm15236-201ENSMUST00000117309 379 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm26461-201ENSMUST00000175064 290 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Mir7654-201ENSMUST00000185082 70 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm27731-201ENSMUST00000185192 107 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm45784-201ENSMUST00000188360 142 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm12585-201ENSMUST00000117307 290 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ttc28Q80XJ3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ttc28Q80XJ3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ttc28Q80XJ3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms