Protein–RNA interactions for Protein: Q80X59

Tmco5b, Transmembrane and coiled-coil domain-containing protein 5B, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmco5bQ80X59 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.79■□□□□ 0.6
Tmco5bQ80X59 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.79■□□□□ 0.6
Tmco5bQ80X59 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.79■□□□□ 0.6
Tmco5bQ80X59 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmco5bQ80X59 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Gm11745-201ENSMUST00000121669 448 ntBASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.78■□□□□ 0.6
Tmco5bQ80X59 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Tmco5bQ80X59 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Gm45612-201ENSMUST00000211320 160 ntBASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
Tmco5bQ80X59 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmco5bQ80X59 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Tmco5bQ80X59 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Gm2756-201ENSMUST00000195851 400 ntBASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Gm43575-201ENSMUST00000196420 516 ntBASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmco5bQ80X59 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms