Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc116Q80X53 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Gm8749-201ENSMUST00000117737 331 ntBASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Gm7461-201ENSMUST00000058918 827 ntBASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc116Q80X53 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm13464-201ENSMUST00000119418 935 ntBASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm5177-201ENSMUST00000183092 997 ntBASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm27741-201ENSMUST00000185060 237 ntBASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm17968-201ENSMUST00000194902 784 ntBASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Mzt1-203ENSMUST00000227948 952 ntBASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms