Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vrk1Q80X41 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vrk1Q80X41 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.08□□□□□ -0.16
Vrk1Q80X41 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vrk1Q80X41 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vrk1Q80X41 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Mir7684-201ENSMUST00000183858 60 ntBASIC14.07□□□□□ -0.16
Vrk1Q80X41 Gm18766-201ENSMUST00000189811 808 ntBASIC14.07□□□□□ -0.16
Vrk1Q80X41 Gm43767-201ENSMUST00000198933 381 ntBASIC14.07□□□□□ -0.16
Vrk1Q80X41 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.07□□□□□ -0.16
Vrk1Q80X41 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.07□□□□□ -0.16
Vrk1Q80X41 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vrk1Q80X41 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.06□□□□□ -0.16
Vrk1Q80X41 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vrk1Q80X41 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.05□□□□□ -0.16
Vrk1Q80X41 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Celf4-206ENSMUST00000224553 1729 ntBASIC14.05□□□□□ -0.16
Vrk1Q80X41 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.05□□□□□ -0.16
Vrk1Q80X41 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Gm5745-201ENSMUST00000183748 313 ntBASIC14.05□□□□□ -0.16
Vrk1Q80X41 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.05□□□□□ -0.16
Vrk1Q80X41 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms