Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm16011-201ENSMUST00000121567 2662 ntBASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rpap1Q80TE0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Gm8835-201ENSMUST00000173096 1169 ntBASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Gm6244-201ENSMUST00000178732 841 ntBASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpap1Q80TE0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpap1Q80TE0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Gm9200-201ENSMUST00000118513 1354 ntBASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Gm13226-201ENSMUST00000117838 404 ntBASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Mir1894-201ENSMUST00000122802 81 ntBASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpap1Q80TE0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Mir692-1-201ENSMUST00000102263 109 ntBASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Gm13392-201ENSMUST00000117708 150 ntBASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Gm4804-201ENSMUST00000182234 999 ntBASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Gm44799-201ENSMUST00000207639 1202 ntBASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpap1Q80TE0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms