Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pif1Q80SX8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Gm13015-201ENSMUST00000118674 204 ntBASIC13.6□□□□□ -0.23
Pif1Q80SX8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.6□□□□□ -0.23
Pif1Q80SX8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.6□□□□□ -0.23
Pif1Q80SX8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pif1Q80SX8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.59□□□□□ -0.23
Pif1Q80SX8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gm25144-201ENSMUST00000179561 110 ntBASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gm25352-201ENSMUST00000179815 110 ntBASIC13.59□□□□□ -0.23
Pif1Q80SX8 Mir7684-201ENSMUST00000183858 60 ntBASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gm29541-201ENSMUST00000191351 678 ntBASIC13.59□□□□□ -0.23
Pif1Q80SX8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.59□□□□□ -0.23
Pif1Q80SX8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pif1Q80SX8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Pif1Q80SX8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pif1Q80SX8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Pif1Q80SX8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pif1Q80SX8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pif1Q80SX8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pif1Q80SX8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Gm11424-201ENSMUST00000121929 829 ntBASIC13.58□□□□□ -0.24
Pif1Q80SX8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms