Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Matn2-206ENSMUST00000228570 2798 ntBASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Gm25745-201ENSMUST00000174945 133 ntBASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Gm8655-201ENSMUST00000221159 852 ntBASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx4Q7TNK1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Gm10499-201ENSMUST00000174094 934 ntBASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx4Q7TNK1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Gm10231-201ENSMUST00000181584 441 ntBASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms