Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TwistnbQ78WZ7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Gm4459-201ENSMUST00000118750 468 ntBASIC15.02■□□□□ -0
TwistnbQ78WZ7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TwistnbQ78WZ7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TwistnbQ78WZ7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Gm6433-201ENSMUST00000118634 875 ntBASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TwistnbQ78WZ7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TwistnbQ78WZ7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms