Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.01□□□□□ -0.49
Vma21Q78T54 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Gm7787-201ENSMUST00000216858 688 ntBASIC12.01□□□□□ -0.49
Vma21Q78T54 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.01□□□□□ -0.49
Vma21Q78T54 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.01□□□□□ -0.49
Vma21Q78T54 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vma21Q78T54 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Vma21Q78T54 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21Q78T54 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vma21Q78T54 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vma21Q78T54 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12□□□□□ -0.49
Vma21Q78T54 Gm5184-201ENSMUST00000220417 1702 ntBASIC12□□□□□ -0.49
Vma21Q78T54 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vma21Q78T54 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12□□□□□ -0.49
Vma21Q78T54 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vma21Q78T54 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Vma21Q78T54 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Gm12008-201ENSMUST00000117791 755 ntBASIC12□□□□□ -0.49
Vma21Q78T54 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12□□□□□ -0.49
Vma21Q78T54 Gm13418-201ENSMUST00000119097 944 ntBASIC12□□□□□ -0.49
Vma21Q78T54 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12□□□□□ -0.49
Vma21Q78T54 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12□□□□□ -0.49
Vma21Q78T54 Gm5253-201ENSMUST00000187104 1025 ntBASIC12□□□□□ -0.49
Vma21Q78T54 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12□□□□□ -0.49
Vma21Q78T54 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12□□□□□ -0.49
Vma21Q78T54 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12□□□□□ -0.49
Vma21Q78T54 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Vma21Q78T54 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Vma21Q78T54 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Gm37812-201ENSMUST00000195216 2475 ntBASIC12□□□□□ -0.49
Vma21Q78T54 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12□□□□□ -0.49
Vma21Q78T54 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12□□□□□ -0.49
Vma21Q78T54 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21Q78T54 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.99□□□□□ -0.49
Vma21Q78T54 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms