Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubfd1Q78JW9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ubfd1Q78JW9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ubfd1Q78JW9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubfd1Q78JW9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Ubfd1Q78JW9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ubfd1Q78JW9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubfd1Q78JW9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubfd1Q78JW9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Gm27618-201ENSMUST00000183671 60 ntBASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ubfd1Q78JW9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Gm28630-201ENSMUST00000187806 498 ntBASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubfd1Q78JW9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Olfr286-202ENSMUST00000205305 969 ntBASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms