Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Gm10499-201ENSMUST00000174094 934 ntBASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RfflQ6ZQM0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RfflQ6ZQM0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Gm43799-201ENSMUST00000201845 579 ntBASIC14.24□□□□□ -0.13
RfflQ6ZQM0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RfflQ6ZQM0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms