Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Gm5312-201ENSMUST00000203728 547 ntBASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Gm5867-201ENSMUST00000063197 592 ntBASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc44a1Q6X893 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.04■□□□□ 0.32
Slc44a1Q6X893 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc44a1Q6X893 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc44a1Q6X893 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Slc44a1Q6X893 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc44a1Q6X893 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Slc44a1Q6X893 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.02■□□□□ 0.32
Slc44a1Q6X893 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc44a1Q6X893 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms