Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm3222-201ENSMUST00000071282 990 ntBASIC12.38□□□□□ -0.43
Rif1Q6PR54 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rif1Q6PR54 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.38□□□□□ -0.43
Rif1Q6PR54 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Haglr-201ENSMUST00000100000 2085 ntBASIC12.37□□□□□ -0.43
Rif1Q6PR54 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Gm38266-201ENSMUST00000194931 421 ntBASIC12.37□□□□□ -0.43
Rif1Q6PR54 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.37□□□□□ -0.43
Rif1Q6PR54 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.37□□□□□ -0.43
Rif1Q6PR54 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rif1Q6PR54 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rif1Q6PR54 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.36□□□□□ -0.43
Rif1Q6PR54 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.36□□□□□ -0.43
Rif1Q6PR54 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rif1Q6PR54 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.35□□□□□ -0.43
Rif1Q6PR54 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.35□□□□□ -0.43
Rif1Q6PR54 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Gm6407-201ENSMUST00000176468 549 ntBASIC12.35□□□□□ -0.43
Rif1Q6PR54 Gm8652-201ENSMUST00000181363 964 ntBASIC12.35□□□□□ -0.43
Rif1Q6PR54 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.35□□□□□ -0.43
Rif1Q6PR54 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms