Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Mir7023-201ENSMUST00000185093 64 ntBASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Nudcd1Q6PIP5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Gm27920-201ENSMUST00000183953 96 ntBASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.85□□□□□ -0.03
Nudcd1Q6PIP5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd1Q6PIP5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd1Q6PIP5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Nudcd1Q6PIP5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd1Q6PIP5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd1Q6PIP5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd1Q6PIP5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd1Q6PIP5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms