Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf4Q6PFF0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Scaf4Q6PFF0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scaf4Q6PFF0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf4Q6PFF0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf4Q6PFF0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms