Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Gm9182-201ENSMUST00000217829 639 ntBASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Gm15806-201ENSMUST00000120696 955 ntBASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Gm17150-201ENSMUST00000165577 381 ntBASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Gm19220-201ENSMUST00000222682 803 ntBASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Gm9899-201ENSMUST00000065519 555 ntBASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snrnp40Q6PE01 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Gm8749-201ENSMUST00000117737 331 ntBASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms