Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Gm12008-201ENSMUST00000117791 755 ntBASIC14□□□□□ -0.17
Rnf220Q6PDX6 Gm9987-201ENSMUST00000069768 567 ntBASIC14□□□□□ -0.17
Rnf220Q6PDX6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Gm38318-201ENSMUST00000195769 1706 ntBASIC14□□□□□ -0.17
Rnf220Q6PDX6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf220Q6PDX6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf220Q6PDX6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf220Q6PDX6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms