Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Gm15957-201ENSMUST00000118893 974 ntBASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Mir7085-201ENSMUST00000184353 66 ntBASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Gm11524-201ENSMUST00000119349 807 ntBASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd4Q6PDQ2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Efs-202ENSMUST00000227037 2540 ntBASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Gm5356-201ENSMUST00000093326 615 ntBASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd4Q6PDQ2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 AY702102-202ENSMUST00000194651 1173 ntBASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Gm44719-201ENSMUST00000206404 149 ntBASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Mir7654-201ENSMUST00000185082 70 ntBASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Gm5425-201ENSMUST00000214125 459 ntBASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd4Q6PDQ2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
Chd4Q6PDQ2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms