Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Smarcd3Q6P9Z1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd3Q6P9Z1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.52□□□□□ -0.24
Smarcd3Q6P9Z1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcd3Q6P9Z1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcd3Q6P9Z1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcd3Q6P9Z1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcd3Q6P9Z1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcd3Q6P9Z1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.52□□□□□ -0.24
Smarcd3Q6P9Z1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcd3Q6P9Z1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.51□□□□□ -0.25
Smarcd3Q6P9Z1 Gm37153-201ENSMUST00000193637 231 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms