Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Mir1897-201ENSMUST00000122581 272 ntBASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Gm10275-202ENSMUST00000168697 495 ntBASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Gm10275-201ENSMUST00000092620 635 ntBASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt40Q6IFX3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt40Q6IFX3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt40Q6IFX3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt40Q6IFX3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.27■□□□□ 0.35
Krt40Q6IFX3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Krt40Q6IFX3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Krt40Q6IFX3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Krt40Q6IFX3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Krt40Q6IFX3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Gm15653-201ENSMUST00000119247 907 ntBASIC17.25■□□□□ 0.35
Krt40Q6IFX3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Efs-202ENSMUST00000227037 2540 ntBASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Krt40Q6IFX3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Krt40Q6IFX3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms