Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AtmQ62388 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.7□□□□□ -0.22
AtmQ62388 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.7□□□□□ -0.22
AtmQ62388 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.7□□□□□ -0.22
AtmQ62388 Mir7654-201ENSMUST00000185082 70 ntBASIC13.7□□□□□ -0.22
AtmQ62388 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.7□□□□□ -0.22
AtmQ62388 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.7□□□□□ -0.22
AtmQ62388 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
AtmQ62388 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.7□□□□□ -0.22
AtmQ62388 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AtmQ62388 Gm27501-201ENSMUST00000183599 107 ntBASIC13.7□□□□□ -0.22
AtmQ62388 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.7□□□□□ -0.22
AtmQ62388 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AtmQ62388 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AtmQ62388 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.69□□□□□ -0.22
AtmQ62388 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.69□□□□□ -0.22
AtmQ62388 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.69□□□□□ -0.22
AtmQ62388 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.69□□□□□ -0.22
AtmQ62388 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.69□□□□□ -0.22
AtmQ62388 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.69□□□□□ -0.22
AtmQ62388 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.69□□□□□ -0.22
AtmQ62388 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.69□□□□□ -0.22
AtmQ62388 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Gm11814-201ENSMUST00000119515 929 ntBASIC13.69□□□□□ -0.22
AtmQ62388 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.69□□□□□ -0.22
AtmQ62388 Gm29199-201ENSMUST00000187766 775 ntBASIC13.69□□□□□ -0.22
AtmQ62388 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.69□□□□□ -0.22
AtmQ62388 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AtmQ62388 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AtmQ62388 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.68□□□□□ -0.22
AtmQ62388 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.68□□□□□ -0.22
AtmQ62388 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.68□□□□□ -0.22
AtmQ62388 Gm45098-201ENSMUST00000207179 657 ntBASIC13.68□□□□□ -0.22
AtmQ62388 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AtmQ62388 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
AtmQ62388 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.67□□□□□ -0.22
AtmQ62388 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
AtmQ62388 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
AtmQ62388 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
AtmQ62388 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
AtmQ62388 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AtmQ62388 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.67□□□□□ -0.22
AtmQ62388 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms