Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim27Q62158 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim27Q62158 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim27Q62158 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim27Q62158 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim27Q62158 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim27Q62158 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim27Q62158 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim27Q62158 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim27Q62158 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim27Q62158 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Gm6973-201ENSMUST00000117080 721 ntBASIC18.07■□□□□ 0.48
Trim27Q62158 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.07■□□□□ 0.48
Trim27Q62158 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim27Q62158 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim27Q62158 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim27Q62158 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
Trim27Q62158 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Trim27Q62158 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim27Q62158 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim27Q62158 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim27Q62158 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim27Q62158 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim27Q62158 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim27Q62158 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim27Q62158 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Trim27Q62158 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim27Q62158 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim27Q62158 Gm45612-201ENSMUST00000211320 160 ntBASIC18.06■□□□□ 0.48
Trim27Q62158 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim27Q62158 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim27Q62158 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim27Q62158 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Trim27Q62158 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim27Q62158 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Trim27Q62158 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim27Q62158 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim27Q62158 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.05■□□□□ 0.48
Trim27Q62158 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Trim27Q62158 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim27Q62158 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim27Q62158 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim27Q62158 Gm27920-201ENSMUST00000183953 96 ntBASIC18.05■□□□□ 0.48
Trim27Q62158 Gm43514-201ENSMUST00000198852 424 ntBASIC18.05■□□□□ 0.48
Trim27Q62158 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms