Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.6□□□□□ -0.23
VcanQ62059 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.6□□□□□ -0.23
VcanQ62059 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Gm13342-201ENSMUST00000121055 207 ntBASIC13.6□□□□□ -0.23
VcanQ62059 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Gm45865-201ENSMUST00000211815 945 ntBASIC13.6□□□□□ -0.23
VcanQ62059 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.6□□□□□ -0.23
VcanQ62059 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.6□□□□□ -0.23
VcanQ62059 Gm38266-201ENSMUST00000194931 421 ntBASIC13.6□□□□□ -0.23
VcanQ62059 Gm38341-201ENSMUST00000195357 515 ntBASIC13.6□□□□□ -0.23
VcanQ62059 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.6□□□□□ -0.23
VcanQ62059 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
VcanQ62059 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.59□□□□□ -0.23
VcanQ62059 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.59□□□□□ -0.23
VcanQ62059 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VcanQ62059 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.59□□□□□ -0.23
VcanQ62059 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VcanQ62059 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.59□□□□□ -0.23
VcanQ62059 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VcanQ62059 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VcanQ62059 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.59□□□□□ -0.23
VcanQ62059 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.59□□□□□ -0.23
VcanQ62059 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcanQ62059 Gm38002-201ENSMUST00000193255 180 ntBASIC13.58□□□□□ -0.23
VcanQ62059 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
VcanQ62059 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VcanQ62059 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
VcanQ62059 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VcanQ62059 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VcanQ62059 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VcanQ62059 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.58□□□□□ -0.24
VcanQ62059 Gm3222-201ENSMUST00000071282 990 ntBASIC13.58□□□□□ -0.24
VcanQ62059 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.58□□□□□ -0.24
VcanQ62059 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.58□□□□□ -0.24
VcanQ62059 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcanQ62059 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.58□□□□□ -0.24
VcanQ62059 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Gm8805-201ENSMUST00000117848 313 ntBASIC13.57□□□□□ -0.24
VcanQ62059 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Gm24644-201ENSMUST00000157114 139 ntBASIC13.57□□□□□ -0.24
VcanQ62059 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.57□□□□□ -0.24
VcanQ62059 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.57□□□□□ -0.24
VcanQ62059 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.57□□□□□ -0.24
VcanQ62059 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.57□□□□□ -0.24
VcanQ62059 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.57□□□□□ -0.24
VcanQ62059 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.57□□□□□ -0.24
VcanQ62059 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Gm5279-201ENSMUST00000199575 745 ntBASIC13.57□□□□□ -0.24
VcanQ62059 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcanQ62059 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms