Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom1Q5SX79 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Gm6415-201ENSMUST00000118488 348 ntBASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Gm15483-201ENSMUST00000120338 456 ntBASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Gm27306-201ENSMUST00000183970 107 ntBASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shroom1Q5SX79 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.1
Shroom1Q5SX79 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.64■□□□□ 0.09
Shroom1Q5SX79 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.64■□□□□ 0.09
Shroom1Q5SX79 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom1Q5SX79 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms