Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Gm5522-201ENSMUST00000189483 1242 ntBASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-1Q5R1I8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Gm8784-201ENSMUST00000222096 1435 ntBASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-1Q5R1I8 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-1Q5R1I8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms