Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav7-2Q5R1I3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav7-2Q5R1I3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav7-2Q5R1I3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav7-2Q5R1I3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav7-2Q5R1I3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav7-2Q5R1I3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Gm8318-201ENSMUST00000182954 872 ntBASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Gm5864-201ENSMUST00000202263 970 ntBASIC11□□□□□ -0.65
Trav7-2Q5R1I3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav7-2Q5R1I3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Gm13884-201ENSMUST00000118103 829 ntBASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Gm15173-201ENSMUST00000122049 433 ntBASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Gm11452-201ENSMUST00000122376 690 ntBASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Gm6550-201ENSMUST00000187574 993 ntBASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Gm7787-201ENSMUST00000216858 688 ntBASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7-2Q5R1I3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7-2Q5R1I3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7-2Q5R1I3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7-2Q5R1I3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7-2Q5R1I3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7-2Q5R1I3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms