Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Mir6404-201ENSMUST00000183699 94 ntBASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Gm9172-201ENSMUST00000212092 954 ntBASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Matn2-206ENSMUST00000228570 2798 ntBASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8d-1Q5R1H8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Gm23547-201ENSMUST00000158210 271 ntBASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Gm43347-201ENSMUST00000200226 580 ntBASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav8d-1Q5R1H8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav8d-1Q5R1H8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms