Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps13aQ5H8C4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Gm24644-201ENSMUST00000157114 139 ntBASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Gm38158-201ENSMUST00000194617 339 ntBASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Gm29787-201ENSMUST00000222129 849 ntBASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Gm43822-201ENSMUST00000200285 476 ntBASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps13aQ5H8C4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Gm27331-201ENSMUST00000183705 60 ntBASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Mir7032-201ENSMUST00000185154 79 ntBASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Gm12928-201ENSMUST00000117115 573 ntBASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vps13aQ5H8C4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps13aQ5H8C4 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.33□□□□□ -0.11
Vps13aQ5H8C4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vps13aQ5H8C4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Vps13aQ5H8C4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps13aQ5H8C4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Gm45865-201ENSMUST00000211815 945 ntBASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Gm45880-201ENSMUST00000213041 853 ntBASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Gm15429-201ENSMUST00000151268 798 ntBASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Gm29649-201ENSMUST00000185649 419 ntBASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Gm8598-201ENSMUST00000221184 836 ntBASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps13aQ5H8C4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps13aQ5H8C4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms