Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rc3h1Q4VGL6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Gm27533-201ENSMUST00000183800 152 ntBASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Gm27321-201ENSMUST00000185021 205 ntBASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rc3h1Q4VGL6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Gm13453-201ENSMUST00000118708 357 ntBASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rc3h1Q4VGL6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm5566-201ENSMUST00000116118 459 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm27989-201ENSMUST00000184721 107 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm29310-201ENSMUST00000185468 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21825-201ENSMUST00000185728 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm29109-201ENSMUST00000185895 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21896-201ENSMUST00000186520 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21873-201ENSMUST00000186728 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21794-201ENSMUST00000187056 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21880-201ENSMUST00000187275 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21826-201ENSMUST00000187451 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21198-201ENSMUST00000188393 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21749-201ENSMUST00000189343 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21901-201ENSMUST00000189568 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm29424-201ENSMUST00000189716 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm28599-201ENSMUST00000189838 694 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21867-201ENSMUST00000189917 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm29269-201ENSMUST00000190087 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21722-201ENSMUST00000190153 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm28423-201ENSMUST00000190701 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21899-201ENSMUST00000190745 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21910-201ENSMUST00000191163 696 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms