Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm17794-201ENSMUST00000220252 955 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm42901-201ENSMUST00000197735 3171 ntBASIC18■□□□□ 0.47
Shank3Q4ACU6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Gm13050-201ENSMUST00000122149 1345 ntBASIC18■□□□□ 0.47
Shank3Q4ACU6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Gm42853-201ENSMUST00000201273 1387 ntBASIC18■□□□□ 0.47
Shank3Q4ACU6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Gm7561-201ENSMUST00000211203 886 ntBASIC18■□□□□ 0.47
Shank3Q4ACU6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Shank3Q4ACU6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shank3Q4ACU6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Gm27514-201ENSMUST00000183692 110 ntBASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Gm18054-201ENSMUST00000207539 555 ntBASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shank3Q4ACU6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Gm11814-201ENSMUST00000119515 929 ntBASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Gm4804-201ENSMUST00000182234 999 ntBASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Gm37714-201ENSMUST00000194742 342 ntBASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Gm6983-201ENSMUST00000214912 628 ntBASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Gm18027-201ENSMUST00000218947 619 ntBASIC17.98■□□□□ 0.47
Shank3Q4ACU6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Shank3Q4ACU6 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.97■□□□□ 0.47
Shank3Q4ACU6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms