Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc27Q3V036 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc27Q3V036 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc27Q3V036 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.77■□□□□ 0.59
Ccdc27Q3V036 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc27Q3V036 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Gm25990-201ENSMUST00000102440 86 ntBASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc27Q3V036 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Gm24589-201ENSMUST00000116692 94 ntBASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc27Q3V036 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc27Q3V036 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc27Q3V036 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccdc27Q3V036 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms