Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fam196aQ3USH1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fam196aQ3USH1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fam196aQ3USH1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fam196aQ3USH1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Gm27731-201ENSMUST00000185192 107 ntBASIC14.71□□□□□ -0.05
Fam196aQ3USH1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Gm6916-202ENSMUST00000205523 195 ntBASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Fam196aQ3USH1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fam196aQ3USH1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Mir3547-201ENSMUST00000175461 88 ntBASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Gm33320-201ENSMUST00000192232 530 ntBASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fam196aQ3USH1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Gm27572-201ENSMUST00000183702 255 ntBASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fam196aQ3USH1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms