Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Gm2272-201ENSMUST00000194903 582 ntBASIC13.86□□□□□ -0.19
Brf2Q3UAW9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.86□□□□□ -0.19
Brf2Q3UAW9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Carlr-201ENSMUST00000181515 2574 ntBASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf2Q3UAW9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Gm14140-201ENSMUST00000119999 995 ntBASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Gm13597-201ENSMUST00000121239 375 ntBASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Brf2Q3UAW9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms