Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.25■□□□□ 0.35
Col5a2Q3U962 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.24■□□□□ 0.35
Col5a2Q3U962 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Gm8652-201ENSMUST00000181363 964 ntBASIC17.24■□□□□ 0.35
Col5a2Q3U962 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.24■□□□□ 0.35
Col5a2Q3U962 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Gm27486-201ENSMUST00000184923 80 ntBASIC17.24■□□□□ 0.35
Col5a2Q3U962 Gm27731-201ENSMUST00000185192 107 ntBASIC17.24■□□□□ 0.35
Col5a2Q3U962 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.24■□□□□ 0.35
Col5a2Q3U962 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.24■□□□□ 0.35
Col5a2Q3U962 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col5a2Q3U962 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.23■□□□□ 0.35
Col5a2Q3U962 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Gm9726-201ENSMUST00000180321 678 ntBASIC17.23■□□□□ 0.35
Col5a2Q3U962 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Gm17795-201ENSMUST00000214505 757 ntBASIC17.23■□□□□ 0.35
Col5a2Q3U962 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.23■□□□□ 0.35
Col5a2Q3U962 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.23■□□□□ 0.35
Col5a2Q3U962 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.22■□□□□ 0.35
Col5a2Q3U962 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.22■□□□□ 0.35
Col5a2Q3U962 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.22■□□□□ 0.35
Col5a2Q3U962 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Gm10012-201ENSMUST00000078252 192 ntBASIC17.22■□□□□ 0.35
Col5a2Q3U962 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms