Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Gm14042-201ENSMUST00000120139 833 ntBASIC14.1□□□□□ -0.15
Hoxc4Q08624 Mir1897-201ENSMUST00000122581 272 ntBASIC14.1□□□□□ -0.15
Hoxc4Q08624 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc4Q08624 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.09□□□□□ -0.15
Hoxc4Q08624 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Gm27437-201ENSMUST00000183429 107 ntBASIC14.09□□□□□ -0.15
Hoxc4Q08624 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.09□□□□□ -0.15
Hoxc4Q08624 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.09□□□□□ -0.15
Hoxc4Q08624 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.09□□□□□ -0.15
Hoxc4Q08624 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 BC001981-202ENSMUST00000191393 1545 ntBASIC14.09□□□□□ -0.15
Hoxc4Q08624 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc4Q08624 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc4Q08624 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc4Q08624 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc4Q08624 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Hoxc4Q08624 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Gm27838-201ENSMUST00000184829 128 ntBASIC14.08□□□□□ -0.16
Hoxc4Q08624 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.08□□□□□ -0.16
Hoxc4Q08624 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms