Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IhhP97812 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.23■□□□□ 0.03
IhhP97812 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Gm12428-201ENSMUST00000119844 727 ntBASIC15.23■□□□□ 0.03
IhhP97812 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IhhP97812 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IhhP97812 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
IhhP97812 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.22■□□□□ 0.03
IhhP97812 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.22■□□□□ 0.03
IhhP97812 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IhhP97812 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.22■□□□□ 0.03
IhhP97812 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IhhP97812 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IhhP97812 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IhhP97812 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.21■□□□□ 0.03
IhhP97812 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IhhP97812 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
IhhP97812 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IhhP97812 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.21■□□□□ 0.03
IhhP97812 Gm9182-201ENSMUST00000217829 639 ntBASIC15.21■□□□□ 0.03
IhhP97812 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
IhhP97812 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IhhP97812 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IhhP97812 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IhhP97812 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
IhhP97812 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.21■□□□□ 0.02
IhhP97812 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IhhP97812 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
IhhP97812 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Gm5566-201ENSMUST00000116118 459 ntBASIC15.2■□□□□ 0.02
IhhP97812 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.2■□□□□ 0.02
IhhP97812 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.2■□□□□ 0.02
IhhP97812 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.2■□□□□ 0.02
IhhP97812 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Gm44872-201ENSMUST00000207864 420 ntBASIC15.2■□□□□ 0.02
IhhP97812 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.2■□□□□ 0.02
IhhP97812 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
IhhP97812 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.2■□□□□ 0.02
IhhP97812 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
IhhP97812 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.2■□□□□ 0.02
IhhP97812 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IhhP97812 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.2■□□□□ 0.02
IhhP97812 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms