Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smn1P97801 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smn1P97801 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smn1P97801 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.65□□□□□ -0.38
Smn1P97801 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smn1P97801 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Smn1P97801 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
Smn1P97801 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smn1P97801 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.64□□□□□ -0.39
Smn1P97801 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.64□□□□□ -0.39
Smn1P97801 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.64□□□□□ -0.39
Smn1P97801 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.64□□□□□ -0.39
Smn1P97801 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Smn1P97801 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smn1P97801 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.64□□□□□ -0.39
Smn1P97801 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smn1P97801 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.63□□□□□ -0.39
Smn1P97801 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smn1P97801 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.63□□□□□ -0.39
Smn1P97801 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.63□□□□□ -0.39
Smn1P97801 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Smn1P97801 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.63□□□□□ -0.39
Smn1P97801 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.63□□□□□ -0.39
Smn1P97801 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Gm27646-201ENSMUST00000183989 110 ntBASIC12.63□□□□□ -0.39
Smn1P97801 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Smn1P97801 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smn1P97801 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.62□□□□□ -0.39
Smn1P97801 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.62□□□□□ -0.39
Smn1P97801 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Smn1P97801 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smn1P97801 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smn1P97801 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smn1P97801 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.62□□□□□ -0.39
Smn1P97801 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smn1P97801 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smn1P97801 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.62□□□□□ -0.39
Smn1P97801 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.62□□□□□ -0.39
Smn1P97801 Gm27704-201ENSMUST00000185094 107 ntBASIC12.62□□□□□ -0.39
Smn1P97801 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.62□□□□□ -0.39
Smn1P97801 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.62□□□□□ -0.39
Smn1P97801 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Smn1P97801 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smn1P97801 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 110.6 ms