Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Xrn1P97789 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Xrn1P97789 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Xrn1P97789 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Xrn1P97789 AC159196.2-201ENSMUST00000224082 1622 ntBASIC20.61■□□□□ 0.89
Xrn1P97789 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Xrn1P97789 AC161252.3-201ENSMUST00000225465 1549 ntBASIC20.61■□□□□ 0.89
Xrn1P97789 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Xrn1P97789 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Xrn1P97789 Gm13612-201ENSMUST00000119276 390 ntBASIC20.61■□□□□ 0.89
Xrn1P97789 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Xrn1P97789 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC20.61■□□□□ 0.89
Xrn1P97789 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Xrn1P97789 Gm27514-201ENSMUST00000183692 110 ntBASIC20.61■□□□□ 0.89
Xrn1P97789 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Xrn1P97789 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.61■□□□□ 0.89
Xrn1P97789 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Xrn1P97789 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Xrn1P97789 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Xrn1P97789 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Xrn1P97789 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Xrn1P97789 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Gm42471-201ENSMUST00000201457 1865 ntBASIC20.6■□□□□ 0.89
Xrn1P97789 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Xrn1P97789 Gm11814-201ENSMUST00000119515 929 ntBASIC20.6■□□□□ 0.89
Xrn1P97789 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Xrn1P97789 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.6■□□□□ 0.89
Xrn1P97789 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC20.6■□□□□ 0.89
Xrn1P97789 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Xrn1P97789 Gm7561-201ENSMUST00000211203 886 ntBASIC20.6■□□□□ 0.89
Xrn1P97789 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Xrn1P97789 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Gm11661-201ENSMUST00000121761 1327 ntBASIC20.6■□□□□ 0.89
Xrn1P97789 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 AC168058.1-201ENSMUST00000219521 2282 ntBASIC20.6■□□□□ 0.89
Xrn1P97789 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrn1P97789 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
Xrn1P97789 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Gm12928-201ENSMUST00000117115 573 ntBASIC20.59■□□□□ 0.89
Xrn1P97789 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Gm27731-201ENSMUST00000185192 107 ntBASIC20.59■□□□□ 0.89
Xrn1P97789 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Xrn1P97789 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrn1P97789 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Xrn1P97789 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC20.58■□□□□ 0.89
Xrn1P97789 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC20.58■□□□□ 0.89
Xrn1P97789 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Xrn1P97789 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC20.58■□□□□ 0.89
Xrn1P97789 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Xrn1P97789 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC20.58■□□□□ 0.89
Xrn1P97789 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrn1P97789 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Xrn1P97789 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Xrn1P97789 Gm12485-201ENSMUST00000119641 291 ntBASIC20.58■□□□□ 0.88
Xrn1P97789 Gm27486-201ENSMUST00000184923 80 ntBASIC20.58■□□□□ 0.88
Xrn1P97789 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Xrn1P97789 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Xrn1P97789 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Xrn1P97789 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Xrn1P97789 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrn1P97789 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrn1P97789 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrn1P97789 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC20.57■□□□□ 0.88
Xrn1P97789 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrn1P97789 Gm43352-201ENSMUST00000196419 3065 ntBASIC20.57■□□□□ 0.88
Xrn1P97789 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC20.57■□□□□ 0.88
Xrn1P97789 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrn1P97789 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC20.57■□□□□ 0.88
Xrn1P97789 Gm18054-201ENSMUST00000207539 555 ntBASIC20.57■□□□□ 0.88
Xrn1P97789 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC20.57■□□□□ 0.88
Xrn1P97789 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Xrn1P97789 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Xrn1P97789 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrn1P97789 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Xrn1P97789 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrn1P97789 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms