Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.02■□□□□ -0
Thumpd3P97770 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Thumpd3P97770 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Thumpd3P97770 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Thumpd3P97770 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Thumpd3P97770 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Thumpd3P97770 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Thumpd3P97770 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.02□□□□□ -0.01
Thumpd3P97770 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.02□□□□□ -0.01
Thumpd3P97770 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Gm7222-201ENSMUST00000117512 906 ntBASIC15.01□□□□□ -0.01
Thumpd3P97770 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Gm2213-201ENSMUST00000197485 688 ntBASIC15.01□□□□□ -0.01
Thumpd3P97770 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.01□□□□□ -0.01
Thumpd3P97770 Psmb5-202ENSMUST00000227257 622 ntBASIC15.01□□□□□ -0.01
Thumpd3P97770 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Thumpd3P97770 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd3P97770 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Thumpd3P97770 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Gm3928-201ENSMUST00000121141 1307 ntBASIC15□□□□□ -0.01
Thumpd3P97770 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Thumpd3P97770 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Thumpd3P97770 Gm6184-201ENSMUST00000120403 1261 ntBASIC15□□□□□ -0.01
Thumpd3P97770 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Thumpd3P97770 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Thumpd3P97770 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Gm43332-201ENSMUST00000202511 1044 ntBASIC15□□□□□ -0.01
Thumpd3P97770 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15□□□□□ -0.01
Thumpd3P97770 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Thumpd3P97770 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Thumpd3P97770 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thumpd3P97770 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15□□□□□ -0.01
Thumpd3P97770 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Gm12260-201ENSMUST00000122447 411 ntBASIC14.99□□□□□ -0.01
Thumpd3P97770 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.99□□□□□ -0.01
Thumpd3P97770 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.99□□□□□ -0.01
Thumpd3P97770 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.99□□□□□ -0.01
Thumpd3P97770 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thumpd3P97770 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms